Protein-Solvent Interaction Energy:
-
i
- : atomic solvation parameter;
- Ai
- : solvent accessible surface area (ASA);
ASA and its derivatives can be calculated analytically from Gauss-Bonnet
theorem:
- p
- : number of intersecting arcs defining ASA;
- ri
- : radius of the i-th sphere;
i
n,n+1 : angle between tangential vectors;
-
ikn
- : angle defining arc length;
-
in
- : polar angle of the ik-th intersection circle;
- aik
- : radius of the ik-th intersection circle.
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